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Horlings HM, Lai C, Nuyten DS, Halfwerk H, Kristel P, van Beers EH, et al. Integration of DNA copy number alterations and prognostic gene expression signatures in breast cancer patients. Clin Cancer Res. 2010;16(2):651-63.
Holstege H, van Beers EH, Velds A, Liu X, Joosse SA, Klarenbeek S, et al. Cross-species comparison of aCGH data from mouse and human BRCA1- and BRCA2-mutated breast cancers. BMC Cancer. 2010;10:455.
Joosse SA, van Beers EH, Tielen IH, Horlings HM, Peterse JL, Hoogerbrugge N, et al. Prediction of {BRCA1-association} in hereditary {non-BRCA1/2} breast carcinomas with {array-CGH}. Breast Cancer Research and Treatment. 2009;116:479-89.
Lai C, Horlings HM, van de Vijver MJ, van Beers EH, Nederlof PM, Wessels LF, et al. SIRAC: Supervised Identification of Regions of Aberration in aCGH datasets. BMC Bioinformatics. 2007;8.
van Beers EH, van Welsem T, Wessels LF, Li Y, Oldenburg RA, Devilee P, et al. Comparative Genomic Hybridization Profiles in Human BRCA1 and BRCA2 Breast Tumors Highlight Differential Sets of Genomic Aberrations. Cancer Research. 2005;65:822-7. Download: Cancer Res.pdf (262.63 KB)
Wessels LF, Nederlof PM, van Welsen T, Reinders MJ. Representation and classification for high-throughput data. In: SPIE-BIOS2002, Biomedial Nanotechnology Architectures and Applications. Vol 4626. San Jose, USA; 2002. p. 226-37. Download: Wess02a.pdf (156.73 KB)
Wessels LF, van Welsem T, Hart AA, van Veer LJ, Reinders MJ, Nederlof PM. Molecular classification of breast carcinomas by comparative genomic hybridization: a specific somatic genetic profile for BRCA1 tumors. Cancer Research. 2002;62:7110-7. Download: Wess02c.pdf (296.3 KB)